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Acer truncatum [Ma Q,et al. Plant J. 2020]
Actinidia arguta [Lu XM,et al. Plant Commun. 2024]
Actinidia arguta cv. ‘Longcheng No.2’[Zhang, F.,et al. Mol Horticulture. 2024]
Actinidia chinensis [Pilkington SM,et al. BMC Genomics. 2018]
Actinidia chinensis Hong Yang v3 [Wu H,et al. Hortic Res. 2019]
Actinidia chinensis Hong Yang v4 [Junyang Yue,et al. Hortic Res. 2023]
Actinidia chinensis Red5 v1.0 [Pilkington SM,et al. BMC Genomics. 2018]
Actinidia eriantha White v1.0 [Tang W,et al. Gigascience. 2019]
Actinidia hemsleyana [Yu X,et al. Plant J. 2023]
Actinidia zhejiangensis [Yu X,et al. Plant J. 2023]
Aegle marmelos [Citrus Pan-genome to Breeding Database]
Allium cepa [Finkers R,et al. G3 (Bethesda). 2021]
Allium fistulosum [Liao N,et al. Nat Commun. 2022]
Allium sativum [Sun X,et al. Mol Plant. 2020]
Ananas comosus [Chen LY,et al. Nat Genet. 2019]
Apium graveolens [Li MY,et al. Hortic Res. 2020]
Arctium lappa [Yang Y,et al. Mol Ecol Resour. 2022]
Areca catechu [Yang Y,et al. Mol Ecol Resour. 2021]
Artemisia annua [Shen Q,et al. Mol Plant. 2018]
Asparagus officinalis [Harkess A,et al. Nat Commun. 2017]
Atalantia buxifolia [Wang X,et al. Nat Genet. 2017]
Averrhoa carambola [Wu S,et al. Hortic Res. 2020]
Benincasa hispida [Xie D,et al. Nat Commun. 2019]
Beta vulgaris [Rodríguez Del Río Á,et al. Plant J. 2019]
Brassica juncea [Yang J,et al. Nat Genet. 2016]
Brassica napus [Chalhoub B,et al. Science. 2014]
Brassica nigra [Yang J,et al. Nat Genet. 2016]
Brassica oleracea [Liu S, et al. Nat Commun. 2014]
Brassica rapa [Wang X,et al. Nat Genet. 2011]
Cajanus cajan [Marla SS,et al. Front Genet. 2020]
Camellia chekiangoleosa [Shen TF,et al. Hortic Res. 2022]
Camellia japonica [Hu Z,et al. BMC Biol. 2024]
Camellia sinensis [Zhang W,et al. Nat Commun. 2020]
Camptotheca acuminata [Zhao D,et al. Gigascience. 2017]
Cannabis sativa [Gao S,et al. Hortic Res. 2020]
Capsella rubella [Slotte T,et al. Nat Genet. 2013]
Capsicum annuum [Kim S,et al. Nat Genet. 2014]
Capsicum baccatum [Kim S,et al. Genome Biol. 2017]
Carica papaya [Ming R,et al. Nature. 2008]
Castanea mollissima [Hoff KJ,et al. Bioinformatics. 2016]
Cerasus x kanzakura [Shirasawa K,et al. DNA Res. 2021]
Chiococca alba [Lau KH,et al. DNA Res. 2020]
Chrysanthemum lavandulifolium [Wen X,et al. Horticulture Research. 2022]
Chrysanthemum makinoi [van Lieshout N,et al. G3 (Bethesda). 2022]
Chrysanthemum morifolium Cmo [Song, A,et al. Nat Commun. 2023]
Chrysanthemum nankingense [Song C, Liu Y,et al. Mol Plant. 2018]
Chrysanthemum nankingense Cn A [Song, A,et al. Nat Commun. 2023]
Chrysanthemum nankingense Cn AB [Song, A,et al. Nat Commun. 2023]
Chrysanthemum seticuspe Gojo [Nakano M,et al. Communications biology. 2021]
Cicer arietinum [Parween S,et al. Sci Rep. 2015]
Citropsis gilletiana [Liu H,et al. Mol Plant. 2022]
Citrullus lanatus [Deng Y,et al. Mol Plant. 2022]
Citrus australasica [Liu H,et al. Mol Plant. 2022]
Citrus clementina [Grimplet J,et al. Curr Genomics. 2022]
Citrus grandis [Liu H,et al. Mol Plant. 2022]
Citrus hongheensis [Liu H,et al. Mol Plant. 2022]
Citrus ichangensis [Wang X,et al. Nat Genet. 2017]
Citrus mangshanensis [Liu H,et al. Mol Plant. 2022]
Citrus maxima [Liu H,et al. Mol Plant. 2022]
Citrus medica [Wang X,et al. Nat Genet. 2017]
Citrus reticulata [Wang L,et al. Mol Plant. 2018]
Citrus sinensis [Liu H,et al. Mol Plant. 2022]
Clausena lansium [Liu H,et al. Mol Plant. 2022]
Cocos nucifera [Wang S,et al. Genome Biol. 2021]
Coffea arabica [Tropical Crop Omics Database]
Coffea canephora [Raharimalala N,et al. Sci Rep. 2021]
Coffea eugenioides [Santos ML,et al. Plant Sci. 2022]
Coffea humblotiana [Raharimalala N,et al. Sci Rep. 2021]
Corchorus capsularis [Islam MS,et al. Nat Plants. 2017]
Corchorus olitorius [Sarkar D,et al. Genom Data. 2017]
Coriandrum sativum [Song X,et al. Plant Biotechnol J. 2020]
Crataegus pinnatifida [Zhang T,et al. J Integr Plant Biol. 2022]
Cucumis melo [Li G,et al. Hortic Res. 2023]
Cucumis sativus [Huang S,et al. Nat Genet. 2009]
Cucurbita argyrosperma [Barrera-Redondo J,et al. Mol Plant. 2019]
Cucurbita maxima [Sun H,et al. Mol Plant. 2017]
Cucurbita moschata [Barrera-Redondo J,et al. Mol Plant. 2019]
Cucurbita pepo [Montero-Pau J,et al. Plant Biotechnol J. 2018]
Cuscuta australis [Sun G,et al. Nat Commun. 2018]
Cynara cardunculus [Scaglione D,et al. Sci Rep. 2016]
Dendrobium catenatum [Zhang GQ,et al. Sci Rep. 2016]
Dianthus caryophyllus [Yagi M,et al. DNA Res. 2014]
Dimocarpus longan Lour [Wang J,et al. Hortic Res. 2022]
Dionaea muscipula [Palfalvi G,et al. Curr Biol. 2020]
Dioscorea dumetorum [Palfalvi G,et al. Curr Biol. 2020]
Dioscorea rotundata [Tamiru M,et al. BMC Biol. 2017]
Diospyros kaki Thumb [https://drive.google.com/drive/folders/1at4LgvkDJ7E3itCrCBS0EWvdlvXbriDt]
Diospyros lotus [Akagi T,et al. PLoS Genet. 2020]
Durio zibethinus [Teh BT,et al. Nat Genet. 2017]
Erigeron breviscapus [Yang J,et al. Gigascience. 2017]
Eriobotrya japonica [Jiang S,et al. Gigascience. 2020]
Eschscholzia californica [Hori K,et al. Plant Cell Physiol. 2018]
Euryale ferox [Yang Y,et al. Nat Plants. 2020]
Ficus carica [Mori K,et al. Sci Rep. 2017]
Fortunella hindsii [Liu H,et al. Mol Plant. 2022]
Fragaria vesca [Zhou Y,et al. Hortic Res. 2023]
Ginkgo biloba [Guan R,et al. Gigascience. 2016]
Glebionis coronaria [Wang S,et al. DNA Res. 2022]
Gnetum montanum [Wan T,et al. Nat Plants. 2018]
Handroanthus impetiginosus [Sunil M,et al. DNA Res. 2014]
Hibiscus cannabinus [Zhang L,et al. Plant Biotechnol J. 2020]
Hibiscus syriacus [Kim YM,et al. DNA Res. 2017]
Ipomoea aquatica [Yang J,et al. Nat Plants. 2017]
Ipomoea batatas [Li M,et al. BMC Plant Biol. 2019]
Ipomoea nil [Hoshino A,et al. Nat Commun. 2016]
Juglans regia [Stevens KA,et al. G3 (Bethesda). 2018]
Lablab purpureus [Chang Y,et al. Gigascience. 2019]
Lagenaria siceraria [Wu S,et al. Plant J. 2017]
Litchi chinensis Sonn [Hu G,et al. Nat Genet. 2022]
Luffa acutangula [Pootakham W,et al. Mol Ecol Resour. 2021]
Luffa cylindrica [Zhang T,et al. Mol Ecol Resour. 2020]
Luvunga scandens [Liu H,et al. Mol Plant. 2022]
Macleaya cordata [Liu X,et al. Mol Plant. 2017]
Malus baccata [Chen X,et al. G3 (Bethesda). 2019]
Malus domestica [Daccord N,et al. Nat Genet. 2017]
Malus fusca [Mansfeld BN,et al. Plant J. 2023]
Malus sieversii [Sun X,et al. Nat Genet. 2020]
Mangifera indica [Mango Genome Consortium,et al. BMC Plant Biol. 2021]
Marchantia polymorpha [Montgomery SA,et al. Curr Biol. 2020]
Medicago sativa [Chen H,et al. Nat Commun. 2020]
Mesembryanthemum crystallinum [Shen S,et al. Plant Biotechnol J. 2022]
Momordica charantia [Urasaki N,et al. DNA Res. 2017]
Moringa oleifera [Chang Y,et al. Gigascience. 2019]
Morus notabilis [Ma B,et al. Hortic Res. 2023]
Murraya paniculata [CPBD: Citrus Pan-genome to Breeding Database]
Musa acuminata [D'Hont A,et al. Nature. 2012]
Nelumbo nucifera [Shi T,et al. Mol Biol Evol. 2020]
Nicotiana sylvestris [Sierro N,et al. Genome Biol. 2013]
Ocimum basilicum [Bornowski N,et al. DNA Res. 2020]
Olea europaea [Cruz F,et al. Gigascience. 2016]
Origanum majorana [Bornowski N,et al. DNA Res. 2020]
Origanum vulgare [Bornowski N,et al. DNA Res. 2020]
Panax ginseng [Kim NH,et al. Plant Biotechnol J. 2018]
Panax ginseng_2022 [Wang ZH,et al. Nat Commun. 2022]
Panax ginseng_t2t [Song Y,et al. Hortic Res. 2024]
Panax notoginseng [https://ftp.cngb.org/pub/CNSA/data2/CNP0001042/CNS0223752/CNA0013972/]
Panax quinquefolius [Zhen-Hui Wang,et al. Nature Communications. 2022]
Panicum miliaceum [Shi J,et al. Nat Commun. 2019]
Papaver somniferum [Guo L,et al. Science. 2018]
Perilla frutescens [Tamura K,et al. DNA Res. 2023]
Persea americana [Rendón-Anaya M,et al. Proc Natl Acad Sci U S A. 2019]
Phalaenopsis equestris [Cai J,et al. Nat Genet. 2015]
Phaseolus acutifolius [Moghaddam SM,et al. Nat Commun. 2021]
Phaseolus vulgaris [Vlasova A,et al. Genome Biol. 2016]
Phoenix dactylifera [ArecaceaeMDB: Arecaceae Multi-omics Database]
Physalis pubescens [Lu J,et al. Hortic Res. 2021]
Piper nigrum [Hu L,et al. Nat Commun. 2019]
Pisum sativum [Yuanyuan Hao,et al. Scientia Horticulturae. 2021]
Platycodon grandiflorus [Kim J,et al. Hortic Res. 2020]
Poncirus trifoliata [Grimplet J,et al. Curr Genomics. 2022]
Populus alba [Ma J,et al. Plant Biotechnol J. 2019]
Potentilla anserina [Gan X,et al. Genes (Basel). 2021]
Prunus armeniaca [Groppi A,et al. Nat Commun. 2021]
Prunus avium [Wang J,et al. PeerJ. 2020]
Prunus dulcis [Alioto T,et al. Plant J. 2020]
Prunus mume [Zheng T,et al. New Phytol. 2022]
Prunus persica [Genome Database for Rosaceae]
Prunus salicina [Fang ZZ,et al. Mol Ecol Resour. 2022]
Prunus yedoensis [Shirasawa K,et al. DNA Res. 2019]
Punica granatum [Qin G,et al. Plant J. 2017]
Pyrus pyrifolia YunhongNO 1 [Sun M,et al. Hortic Res. 2023]
Raphanus sativus [Shirasawa K,et al. DNA Res. 2020]
Rosa chinensis [Raymond O,et al. Nat Genet. 2018]
Rosa multiflora [Nakamura N,et al. DNA Res. 2018]
Rosmarinus officinalis [Bornowski N,et al. DNA Res. 2020]
Rubus occidentalis [VanBuren R,et al. Gigascience. 2018]
Saccharum officinarum [Zhang Q,et al. Nat Genet. 2022]
Saccharum officinarum spontaneum R570 v2.1 [Phytozome]
Saccharum spontaneum [Zhang J,et al. Nat Genet. 2018]
Salvia splendens [Dong AX,et al. Gigascience. 2018]
Sechium edule [Fu A,et al. Hortic Res. 2021]
Selaginella moellendorffii [Banks JA,et al. Science. 2011]
Senna tora [Kang SH,et al. Nat Commun. 2020]
Sinapis alba [Kumari P,et al. PLoS One. 2020]
Siraitia grosvenorii [Xia M,et al. Gigascience. 2018]
Solanum lycopersicum [EnsemblPlants]
Solanum lycopersicum [Xue JY,et al. Hortic Res. 2023]
Solanum lycopersicum [Takei H, et al. DNA Res. 2021]
Solanum melongena [Barchi L,et al. Sci Rep. 2019]
Solanum tuberosum [Zhou Q,et al. Nat Genet. 2020]
Spinacia oleracea [Xu C,et al. Nat Commun. 2017]
Strobilanthes cusia [Xu W,et al. Plant J. 2020]
Tarenaya hassleriana [Cheng S,et al. Plant Cell. 2013]
Theobroma cacao [Argout X,et al. BMC Genomics. 2017]
Thlaspi arvense [Geng Y,et al. BMC Biol. 2021]
Toona sinensis [Ji YT,et al. Mol Ecol Resour. 2021]
Trichosanthes anguina [Ma L,et al. Hortic Res. 2020]
Trifolium pratense [De Vega JJ,et al. Sci Rep. 2015]
Vaccinium darrowii [Cui F,et al. Plant Commun. 2022]
Vaccinium duclouxii [Zeng T,et al. Hortic Res. 2023]
Vaccinium macrocarpon [Diaz-Garcia L,et al. Front Plant Sci. 2021]
Vaccinium myrtillus [Wu C,et al. Mol Ecol Resour. 2022]
Vanilla planifolia [Hasing T,et al. Nat Food. 2020]
Vigna unguiculata [Xia Q,et al. Sci Data. 2019]
Viti vinifera [Xiaoya Shi,et al. Horticulture Research. 2023]
Vitis vinifera Chardonnay [Roach MJ,et al. PLoS Genet. 2018]
Vitis vinifera wine grape [Shi X,et al. Hortic Res. 2023]
Zingiber officinale [Cheng SP,et al. Hortic Res. 2021]
Ziziphus jujuba [Huang J,et al. PLoS Genet. 2016]
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