Comparison of general features of the cp genome in eight plant species.
Data source
Species Genome size (bp) GC content (%) FASTA LSC length (bp) SSC length (bp) IR length (bp) Number of genes Number of protein-coding genes Number of tRNA genes Number of rRNA genes GenBank
Nymphaea nouchali 159,978 39.14 >NC_059865.1 Nymphaea nouchali chloroplast, complete genome 90,001 19,603 50,374 130 85 37 8 NC_059865.1
Nymphaea alba 159,930 39.15 >NC_006050.1 Nymphaea alba chloroplast, complete genome 90,006 19,562 50,362 130 85 37 8 NC_006050.1
Nymphaea lotus 159,311 39.1 >NC_041238.1 Nymphaea lotus chloroplast, complete genome 89,610 19,333 50,368 130 85 37 8 NC_041238.1
Brasenia schreberi 158,957 39.05 >MZ328718.1 Brasenia schreberi chloroplast, complete genome 88,763 19,512 50,682 134 89 37 8 MZ328718.1
Victoria cruziana 158,992 39.06 >KY392766.1 Victoria cruziana chloroplast, complete genome 89,569 19,532 49,891 133 88 37 8 KY392766.1
Barclaya longifolia 158,359 39.13 >NC_035633.2 Barclaya longifolia isolate NY665 chloroplast, complete genome 88,696 19,183 50,480 134 89 37 8 NC_035633.2
Euryale ferox 159,930 39.08 >MZ636531.1 Euryale ferox chloroplast, complete genome 89,677 20,201 50,052 126 83 35 8 MZ636531.1
Nuphar pumila 160,737 39.08 >MH161176.1 Nuphar pumila chloroplast, complete genome 90,608 18,865 51,264 129 84 37 8 MH161176.1
Comparative analysis of the complete chloroplast genome of seven Nymphaea species
Data source
Species Length FASTA 15-19 bp 20-24 bp 25-29 bp 30-60bp Mononucleotide SSR Dinucleotide SSR Trinucleotide SSR Tetranucleotide SSR Pentanucleotide SSR Hexanucleotide SSR SSR in LSC SSR in SSC SSR in IR GenBank
Nymphaea colorata 159842 bp >MT107631.1 Nymphaea colorata chloroplast, complete genome 153 18 3 6 61 4 64 4 0 0 78 27 28 MT107631.1
Nymphaea tetragona 159956 bp >MT107634.1 Nymphaea tetragona chloroplast, complete genome 168 24 7 79 61 4 70 2 3 0 81 30 28 MT107634.1
Nymphaea odorata 159968 bp >MT107636.1 Nymphaea odorata chloroplast, complete genome 163 11 7 81 72 4 71 2 1 0 89 32 28 MT107636.1
Nymphaea rubra 159322 bp >MT107632.1 Nymphaea rubra chloroplast, complete genome 147 14 5 76 63 6 69 7 2 0 83 31 32 MT107632.1
Nymphaea gigantea 160179 bp >MT107637.1 Nymphaea gigantea chloroplast, complete genome 151 27 1 96 56 5 65 5 4 1 77 29 28 MT107637.1
Nymphaea potamophila 159232 bp >MT107633.1 Nymphaea potamophila chloroplast, complete genome 158 16 7 80 59 5 71 4 0 0 78 31 30 MT107633.1
Nymphaea micrantha 159900 bp >MT107635.1 Nymphaea micrantha chloroplast, complete genome 155 20 7 87 63 4 62 4 1 0 77 29 28 MT107635.1
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