TropDBTropical Crops Genome Database

Download genome file

Species File File Size
Manihot esculenta v6 DNA GFF Protein CDS 690MB
Manihot esculenta v7 DNA GFF Protein CDS 874MB
Manihot esculenta v8 DNA GFF Protein CDS 825MB
Manihot esculenta T2T DNA GFF Protein CDS 512MB
Saccharum spontaneum DNA GFF Protein CDS 560MB
Saccharum officinarum DNA GFF Protein CDS 4.45GB
Saccharum hybrid cultivar R570 DNA GFF Protein CDS 15GB
Saccharum spontaneum NpX DNA GFF Protein CDS 849MB
Elaeis guineensis EG5 DNA GFF Protein CDS 1.74GB
Elaeis guineensis EG11 DNA 1.73GB
Elaeis guineensis EGPMv6 DNA 1.13GB
Elaeis guineensis EGV3 DNA 1.59GB
Olea europaea v1.0 DNA GFF Protein CDS 1.42GB
Olea europaea A9 DNA GFF Protein 2.08GB
Hibiscus cannabinus DNA GFF Protein CDS 1.27GB
Bombax ceiba DNA GFF Protein CDS 858MB
Hevea brasiliensis GT1 DNA GFF Protein CDS 1.6GB
Hevea brasiliensis tree reyan8-79 DNA GFF Protein CDS 382.1MB

Download expression file

Species Handling method Computing method File Size
Manihot esculenta Varous organs FPKM 7.23MB
Manihot esculenta Xanthomonas FPKM 3.09MB
Saccharum officinarum Varous organs TMM 6.23MB
Saccharum officinarum Drought stress TMM 7.68MB
Saccharum officinarum Cold stress TMM 6.18MB
Saccharum officinarum Cold stress TMM 6.18MB
Elaeis guineensis Rought and salinity TMM 7.25MB
Elaeis guineensis Salt stress TMM 2.60MB
Elaeis guineensis Cold stress TMM 2.46MB
Hibiscus cannabinus Various organs TMM 2MB
Hibiscus cannabinus Salt stress FPKM 4.19MB
Hevea brasiliensis Various organs TMM 4.13MB
Hevea brasiliensis Laticifer replicate FPKM 1.82MB
Hevea brasiliensis Drying process FPKM 5.07MB
Hevea brasiliensis Cold stree FPKM 6.09MB

Download metabolome file

File File Size
Cassava_metabolite.txt 204KB
Sugarcane_metabolite.txt 95.9KB
Elaeis_guineensis_Metabolome_sample_information.txt 2.33KB
Elaeis_guneensis_metabolite_content.txt 537KB
Elaeis_guneensis_metabolite_information.txt 146KB

Download variome file

File File Size
573_cassava.indel.vcf.gz 38.2GB
573_cassava.snp.vcf.gz 187GB
98_oilpalm.indel.vcf.gz 3.19GB
98_oilpalm.snp.vcf.gz 37.6GB
336_rubbertree.indel.vcf.gz 449MB
336_rubbertree.snp.vcf.gz 8.76GB