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The Water Lily Pond (WLP, https://bioinformatics.hainanu.edu.cn/waterlily) aims to store and analyze big data related to water lilies, because of their significant values in evolutionary biology and economic potential. Water lilies are not only key plants in ecosystems but also possess economic importance. This database offers data analysis and visualization services, providing a solid foundation for comparative genomics and botanical research, and facilitating deeper exploration of the genetic traits of water lilies and their role in biodiversity conservation. WLP will be continuously updated to the best of our abilities.

WLP Director
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Prof. Fei Chen

WLP Lead Developer
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Mr. Chengjun Zhao

WLP Board members
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Prof. Feng Chen

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Prof. Yves Van de Peer

Person 3

Prof. Wenquan Wang

Person 4

Prof. Jiayu Xue

Person 4

Prof. Yingchun Xu

Person 4

Prof. Liangsheng Zhang

Person 4

Mr. Tianlong Zhu

Person 4

Prof. Pedro García-Caparros

Person 4

Prof. Chengjie Chen

WLP Developer
Person 5

Dr. Yayu Chen

Person 6

Ms. Lishuang Yang

Person 7

Dr. Shuang He

Person 8

Mr. Yunqing Luo

Person 9

Dr. Ji Zhang

Person 10

Dr. Yufan Liang

Person 11

Dr. Junyu Zhang

Person 12

Mr. Hongbin Zhang

Person 13

Mr. Hongliang Chen

Person 14

Ms. Shuting Yang

Person 15

Ms. Guilian Guo

Person 16

Mr. Wenbao Dai

Person 17

Prof. Zhijuan Yang

Person 18

Dr. Yuhan Zhou

Person 19

Dr. Wasi Ullah Khan

Person 4

Prof. Yifan Jiang

Person 4

Prof. Guanhua Liu

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Dr. Junhao Chen

(08-12-2024) To highlight omics, move Community and Library to the home page.
(01-12-2024) We've collected more content from the Community.
(15-11-2024) The Feedback feature is now deployed and live!
(04-11-2024) Economic values module have been deployed to the home page.
(31-10-2024) Horticultural features such as Flower genes have been deployed to the home page.
(20-10-2024) Add Anthocyanin genes search function on home page.
(15-10-2024) The Primer feature is now deployed and live!

more.
The National Natural Science Foundation of China (32172614, 31801898)
Hainan Province Science and Technology Special Fund (ZDYF2023XDNY050)
Hainan Provincial Natural Science Foundation of China (324RC452)
The Project of National Key Laboratory for Tropical Crop Breeding (NO. NKLTCB202337)
Your citation is really important for us to get fundings to update this database.
We have provided a detailed introduction to each module, covering the following topics: Category, Genomics, Transcriptomics, Proteomics, Metabolomics, Phenomics, Breeding, Literature, and Community. Users can easily and quickly select the specific tutorial they are interested in by clicking on the module names at the top of the Tutorial page.
Details
1. Zhang, L., Chen, F., Zhang, X., Li, Z., Zhao, Y., Lohaus, R., ... & Tang, H. (2020). The water lily genome and the early evolution of flowering plants. Nature, 577(7788), 79-84.
2. Friedman, W. E. (2008). Hydatellaceae are water lilies with gymnospermous tendencies. Nature, 453(7191), 94-97.
3. Saarela, J. M., Rai, H. S., Doyle, J. A., Endress, P. K., Mathews, S., Marchant, A. D., ... & Graham, S. W. (2007). Hydatellaceae identified as a new branch near the base of the angiosperm phylogenetic tree. Nature, 446(7133), 312-315.
4. Williams, J. H., & Friedman, W. E. (2002). Identification of diploid endosperm in an early angiosperm lineage. Nature, 415(6871), 522-526.
5. Friis, E. M., Pedersen, K. R., & Crane, P. R. (2001). Fossil evidence of water lilies (Nymphaeales) in the Early Cretaceous. Nature, 410(6826), 357-360.
6. Nee, S., & Harvey, P. H. (1994). Getting to the roots of flowering plant diversity. Science, 264(5165), 1549-1550.
7. Ge Sun et al., (2002). Archaefructaceae, a New Basal Angiosperm Family. Science 296,899-904.
Details
Citation format
Water Lily Pond: Pioneering a Multi-Omics Database for Advancing Botanical Research, in press.
Database Available at: https://bioinformatics.hainanu.edu.cn/waterlily/




Genomic and genetic tools
JBrowse
eFP-gene
GO Enrichment
KEGG Enrichment
Evolutionary tools
BLAST
Synteny
Gene Family Search
Transcription Factors
Key horticultural genes!
Anthocyanin genes
Auxin genes
Flower genes
Glucosinolate genes
Resistance genes
Transcription Factors
Library
References
Books
Omics data
Products
Cultivation and management
Patents
Community
Culture
Conferences
Links
Tutorial
Highlights

Number of water lilies

Number of pictures

Number of genes

Number of literatures

Number of annotations

Number of tools

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